PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0032ss00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 516aa    MW: 57817.8 Da    PI: 5.2111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0032ss00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.4e-13320366354
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        ++h + E++RR+++N ++  Lr l+P++     +K + a+++  A++YI++L
  Vang0032ss00010.1 320 TKHFATEKQRREQLNGKYKILRNLIPNP-----TKIDRASVVGDAIDYIREL 366
                        79**************************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-15315384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.046317366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-10320366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.28E-11320366No hitNo description
Gene3DG3DSA:4.10.280.101.3E-11320375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-10323372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MSTGDRPKMH EQTGCFDPNT MEESIPSLKD NFPQTLADPL TPSSHMVVDN TTNTDNGLEE  60
NLRLSVEELS FNHHNLQHQD ISTYASGVTP TSASDIPHSQ QHLGLNMGNS YINNTSNMDN  120
HLVQQVIDVL PYQQSTWDPT TVQELPDIAY ANQIEQQQNE QQFQQMETQN CSQSFNPSSI  180
LDPPYPSPDL LNLLHLPRCS APSLHTNPTI YLTNPTQNTP NFQNPLAFLG DLPIGSDNNT  240
SASSVLYDPL FHLNLPPQPP ALRELFQSLP RGYSMPTNSR NGSLFGGDEI EGDGSQLDMG  300
VLEFNRVTPT VAKGRGGKAT KHFATEKQRR EQLNGKYKIL RNLIPNPTKI DRASVVGDAI  360
DYIRELIRTV NELKLLVEKK RYGRERCKRP KTEEDGAESC NIKPFGDPDG GIRTSWLQRK  420
SKDSEVDVRI IDDDVTIKLF QRKKINCLLF VSKVLDELQL ELHHVAGGHV GEYCSFLFNS  480
KIIEGSSVYA SAIANRVIDV LDSYFDWALW LNMKI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0032ss00010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017405623.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_017405625.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_017405626.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A0S3R0W20.0A0A0S3R0W2_PHAAN; Uncharacterized protein
STRINGXP_007163873.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-75bHLH family protein