PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0027ss00450.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 245aa    MW: 27720.5 Da    PI: 4.9934
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0027ss00450.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171e-05811131754
                        HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         ++f  L   +P +     kK +K++iL +A++Y+k+L
  Vang0027ss00450.1  81 TERFIALSATIPGL-----KKTDKSSILGEAINYVKEL 113
                        67788888899998.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.31864113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.001871119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.10E-479117No hitNo description
SuperFamilySSF474591.11E-979133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.5E-1180130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
LQNQHFCFLL SHGASMAELL SSNGKNRNTR HGDLMLEECH TQEEDFLREI LGEPGFSSET  60
ETHHHNFTSP TDAETLTMEL TERFIALSAT IPGLKKTDKS SILGEAINYV KELKERVTEL  120
EERNKRGKES VMILKKSDVC ESSERDSKDW CRMLPDIEAR VMENEVLIEI HCEKEEGVEL  180
KLLDHLENLH LCVTATSVLP FGNSTLGITI IAQMGDAYKM TVNDVVKNLR KVFMNHMNIN  240
GDPY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0027ss00450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424102.11e-117PREDICTED: transcription factor bHLH18-like isoform X1
RefseqXP_017424103.11e-117PREDICTED: transcription factor bHLH25-like isoform X2
TrEMBLA0A0L9UQ371e-116A0A0L9UQ37_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SF601e-116A0A0S3SF60_PHAAN; Uncharacterized protein
STRINGGLYMA13G44594.14e-93(Glycine max)
STRINGXP_007150795.11e-92(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-32bHLH family protein