PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0026ss00720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 211aa MW: 23455.4 Da PI: 9.9919 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.6 | 5.7e-08 | 125 | 148 | 4 | 27 |
XCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkae 27 ++r +r++kNRe+A rsR+RK+++ Vang0026ss00720.1 125 DRRNKRMIKNRESAARSRARKQEK 148 689*******************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-5 | 122 | 200 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-13 | 125 | 190 | No hit | No description |
SuperFamily | SSF57959 | 6.89E-5 | 126 | 149 | No hit | No description |
CDD | cd14707 | 2.44E-24 | 126 | 195 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 129 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MEEVWKDINL ATLNDQVTRS ATTHSNLGGV ILQDFLARPF TMDPPNTILS SQTPSLYGAP 60 SSPAPPLLTA LSLSSHPHLH FDPHTQKPSH PHHPPPPSNH SCFTTPTTAS LGAKRFAEPD 120 CNLGDRRNKR MIKNRESAAR SRARKQEKFS FTFSLSLIFP TAYTNELEVE VEQLKEENAR 180 LKRQQKQLSE VAASEQKKKS SLYRASTAPF * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0026ss00720.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017408438.1 | 1e-154 | PREDICTED: protein FD-like | ||||
TrEMBL | A0A0L9TC55 | 1e-135 | A0A0L9TC55_PHAAN; Uncharacterized protein | ||||
STRING | XP_007157879.1 | 2e-81 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-22 | bZIP family protein |