PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0021ss02010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 322aa    MW: 36363.2 Da    PI: 9.0766
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0021ss02010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.26e-313211150128
                NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        k   +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ls+ +++ +g+kk Lvfy+gr pkg+ktdW+m+eyrl
  Vang0021ss02010.1  32 KSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSsGSKRIGVKKALVFYSGRPPKGSKTDWIMNEYRL 111
                        2233789*************************************9977888***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100538.3931138IPR003441NAC domain
PfamPF023656.0E-1614111IPR003441NAC domain
SuperFamilySSF1019414.05E-3832138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
LLSLVKNKLK NLGIIGFCLR PKCLCKSLNE DKSLFGEEEW YFFSPRDRKY PNGLRPNRAA  60
ASGYWKATGT DKPILSSSGS KRIGVKKALV FYSGRPPKGS KTDWIMNEYR LIDTITKSPR  120
LKGSMRLDDW VLCRVRHKGY SSKISGENQE NPSELNLSAK LPRSEGYPTN MNCRADMITD  180
YQYKDYQIIA SILVGAPVSP TENMPNMSFK GCKGTNLVSV FEDGFTKVNS QMTFPSLDSY  240
FNPLTRKSNE DEQYGNLISF NRKFNAEDKM DESPSKVLAS RELNCYNQSQ SEDDIFSGNP  300
PDTGINFQEL NDLVFTGRYP Q*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-453114364170NO APICAL MERISTEM PROTEIN
1ut4_B3e-453114364170NO APICAL MERISTEM PROTEIN
1ut7_A3e-453114364170NO APICAL MERISTEM PROTEIN
1ut7_B3e-453114364170NO APICAL MERISTEM PROTEIN
3swm_A3e-453114367173NAC domain-containing protein 19
3swm_B3e-453114367173NAC domain-containing protein 19
3swm_C3e-453114367173NAC domain-containing protein 19
3swm_D3e-453114367173NAC domain-containing protein 19
3swp_A3e-453114367173NAC domain-containing protein 19
3swp_B3e-453114367173NAC domain-containing protein 19
3swp_C3e-453114367173NAC domain-containing protein 19
3swp_D3e-453114367173NAC domain-containing protein 19
4dul_A3e-453114364170NAC domain-containing protein 19
4dul_B3e-453114364170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0021ss02010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017423161.10.0PREDICTED: NAC transcription factor 56-like
TrEMBLA0A0S3SGL10.0A0A0S3SGL1_PHAAN; Uncharacterized protein
STRINGXP_007150216.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-53NAC-like, activated by AP3/PI