PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0021ss00530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 568aa MW: 63528.1 Da PI: 5.8815 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 487 | 531 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r+rr+ kNRe+A rsR+R++a++ eLe + +L++eN+ Lk+ l Vang0021ss00530.1 487 RRQRRMLKNRESAARSRARRQAYTVELEAELNNLKNENENLKNML 531 69************************************9999544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.1820 | 9.2E-26 | 72 | 207 | IPR029058 | Alpha/Beta hydrolase fold |
SuperFamily | SSF53474 | 6.53E-17 | 72 | 223 | IPR029058 | Alpha/Beta hydrolase fold |
Pfam | PF12146 | 2.3E-7 | 98 | 212 | IPR022742 | Serine aminopeptidase, S33 |
SMART | SM00338 | 8.5E-10 | 483 | 547 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.829 | 485 | 537 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.8E-10 | 487 | 533 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-11 | 487 | 533 | No hit | No description |
SuperFamily | SSF57959 | 1.83E-9 | 487 | 536 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 490 | 505 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 568 aa Download sequence Send to blast |
LTYMRGTIIT LHCITHCSAS ASASAAHDVG VAVSFEAMVI PIAVALVVIL IGLVYQAIKP 60 PVPKICGSIG GPQVTSPRVK LSDGRNLAYR EFGVPKEEAR YKIIVIHGYN SFKDTTLPVS 120 QELIEELGIY FLHFDRAGYG ESDPHSSRSV KSEAYDIQEL ADKLEIGDKF YIIGMSMGDV 180 TKDLYTYNKK SFGRLLGAAL VAPFISYWWP SFPDHLLREA FQMLPRQELF LIALSSALMN 240 FQQSEQEVPL QDTEASFYQL NQQSSEVSLP VDEEGSDKNG KSVGSISMVD EFIASIWNTD 300 EFQLNPPLPV YDEAANNNSV APEPTIPQPA SFSVPPPICK KTTDEVWSQI QNSQPQQNED 360 NNSLASDETL QKDPTFGEMT LEDFLIKAGV VTESTLFTTI LPQNHFANIP TNIPFNTSYI 420 LIGTTAPNMP CGRFEPHQML PQNNHFIVRN FTTTNVAVEN NCQNVAESSG KGKKRIIQGP 480 PEVVIERRQR RMLKNRESAA RSRARRQAYT VELEAELNNL KNENENLKNM LAEDERKRLE 540 VLTQRKAPTT VQKRNEKKRK LNRPLSAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 551 | 559 | QKRNEKKRK |
2 | 552 | 559 | KRNEKKRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0021ss00530.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017423951.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
TrEMBL | A0A0S3SH39 | 0.0 | A0A0S3SH39_PHAAN; Uncharacterized protein | ||||
STRING | XP_007150073.1 | 1e-140 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF351 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44460.1 | 4e-36 | bZIP family protein |