PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0021ss00430.2

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 404aa MW: 44970.9 Da PI: 9.3985

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0021ss00430.2	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.9e-10	130	164	4	38
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 k rr+++NReAAr+sR+RKka++++Le +L Vang0021ss00430.2 130 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKL 164 6889*************************865555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-7	127	192	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.243	129	173	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.6E-7	130	166	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.64E-7	131	174	No hit	No description
CDD	cd14708	1.35E-20	131	181	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.4E-7	132	175	No hit	No description
PROSITE pattern	PS00036	0	134	149	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.7E-27	213	284	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence Send to blast
LRKVCMASHR IGELALFTAR PAATLEMFPS WPMRFQQTPR GGSKSGGEST DSGLSSKTEP 60 PFEAESPMSK KASSSDHQAF DQQHLQHRQQ LQQDMASDAA RTASSQNQSA AKSQEKRKGT 120 GSTSEKPLDA KTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLTQIEQE LQRARSQGLF 180 VDCGGVGSNV SSAGAAMFDM EYGRWLEEDH RLMGELRNGL QVPLSDSDMR VMVDGYLSHY 240 DEIFRLKGVA AKSDVFHLIN GMWTSQAERC FLWIGGFRPS DLITQAEEAL SQGLEQLQQS 300 LVDTIAGGPV VDGVQQMVVA MSKLANLEGF VRQADNLRQQ TLHQLCRLLT VRQAARCFIV 360 IGEYYGRLRA LSSLWASRPR ENASGPTFSE SFLEFLRDVI KIH*

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence Send to blast

LRKVCMASHR IGELALFTAR PAATLEMFPS WPMRFQQTPR GGSKSGGEST DSGLSSKTEP  60
PFEAESPMSK KASSSDHQAF DQQHLQHRQQ LQQDMASDAA RTASSQNQSA AKSQEKRKGT  120
GSTSEKPLDA KTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLTQIEQE LQRARSQGLF  180
VDCGGVGSNV SSAGAAMFDM EYGRWLEEDH RLMGELRNGL QVPLSDSDMR VMVDGYLSHY  240
DEIFRLKGVA AKSDVFHLIN GMWTSQAERC FLWIGGFRPS DLITQAEEAL SQGLEQLQQS  300
LVDTIAGGPV VDGVQQMVVA MSKLANLEGF VRQADNLRQQ TLHQLCRLLT VRQAARCFIV  360
IGEYYGRLRA LSSLWASRPR ENASGPTFSE SFLEFLRDVI KIH*

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0021ss00430.2

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015040	1e-152	AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017423025.1	0.0	PREDICTED: transcription factor TGA2-like isoform X1
Swissprot	Q93XM6	1e-152	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A0L9UNH4	0.0	A0A0L9UNH4_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3SGX3	0.0	A0A0S3SGX3_PHAAN; Uncharacterized protein
STRING	XP_007150072.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-130	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]