PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678470896 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | C2H2 | ||||||||
Protein Properties | Length: 158aa MW: 18548 Da PI: 5.0535 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.6 | 2.2e-05 | 65 | 86 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C+ Cg +F+r+ nLkrH + H 678470896 65 CSLCGIHFTRNWNLKRHNDKfH 86 *****************87777 PP | |||||||
2 | zf-C2H2 | 13 | 0.00032 | 128 | 151 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++Cg + ++ +L H++ H 678470896 128 FSCTYCGDRSTTLGQLFWHLQEnH 151 89******************9888 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00355 | 7.1 | 63 | 86 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 8.6 | 63 | 91 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 65 | 86 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 28 | 90 | 112 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 92 | 113 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.1 | 128 | 151 | IPR015880 | Zinc finger, C2H2-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
DDEEIYEVLG DLFLDDEPEG TADENSRADV EQHEVDRNLE NSVVDTQGGN REQVNNSQED 60 NRPMCSLCGI HFTRNWNLKR HNDKFHRKSN NCLICKKPYH FVDNLIHHVH VHHKDAHDEF 120 QPNQDNSFSC TYCGDRSTTL GQLFWHLQEN HEVQNHLT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678470896 |