PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678462558

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

GeBP

Protein Properties

Length: 378aa MW: 41808.9 Da PI: 5.0594

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678462558	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	111.8	4.5e-35	81	183	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlw++eDei lLqG++d+++++ + ++d++afy++++++ +++++k+qlveK+rrLKkK+++ v++ +sgk+ f+++hdq +fe+s+ki 678462558 81 KLFQRLWTDEDEIELLQGFLDYTSQRCGpygssQHHHDTTAFYDQIRSKFQLDFNKNQLVEKLRRLKKKYRNLVNRFSSGKDYIFKSPHDQLTFEISSKI 180 579*****************999843354445555************************************************************* PP DUF573 96 Wgs 98 Wgs 678462558 181 WGS 183 *95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.9E-33	83	182	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
MATAAVPRHD AVFNEDEDLL DDDDDQISDH DEDDSASSAP IALDRAPPST ALVTIAVHGV 60 PDLQQQELFL PESKKPDESR KLFQRLWTDE DEIELLQGFL DYTSQRCGPY GSSQHHHDTT 120 AFYDQIRSKF QLDFNKNQLV EKLRRLKKKY RNLVNRFSSG KDYIFKSPHD QLTFEISSKI 180 WGSTVSNANG SAAFRSTGLA VEEDDDDLNN PAFAGFQSPV PCGIDVNSKA PRPRKRNRAG 240 AVKLEEKMQP HGNYCSVNSI QPPPVGVTPI AAPVLGVSGP MSTMIEETVK SCLPPILKEL 300 LGTSTGSFLC PSGLCSGQGL GARNPLSLCL PGAIACDKIS DDRWRKQQIL ELEVFSKRLE 360 LVQSQIRDQL QELRSTGN

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

MATAAVPRHD AVFNEDEDLL DDDDDQISDH DEDDSASSAP IALDRAPPST ALVTIAVHGV  60
PDLQQQELFL PESKKPDESR KLFQRLWTDE DEIELLQGFL DYTSQRCGPY GSSQHHHDTT  120
AFYDQIRSKF QLDFNKNQLV EKLRRLKKKY RNLVNRFSSG KDYIFKSPHD QLTFEISSKI  180
WGSTVSNANG SAAFRSTGLA VEEDDDDLNN PAFAGFQSPV PCGIDVNSKA PRPRKRNRAG  240
AVKLEEKMQP HGNYCSVNSI QPPPVGVTPI AAPVLGVSGP MSTMIEETVK SCLPPILKEL  300
LGTSTGSFLC PSGLCSGQGL GARNPLSLCL PGAIACDKIS DDRWRKQQIL ELEVFSKRLE  360
LVQSQIRDQL QELRSTGN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678462558

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020552957.1	1e-155	probable transcription factor At3g04930
TrEMBL	A0A2G9HBP4	1e-163	A0A2G9HBP4_9LAMI; Uncharacterized protein
STRING	Migut.N01941.1.p	1e-132	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4052	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-63	DNA-binding storekeeper protein-related transcriptional regulator