PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678461261 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 385aa MW: 43196.9 Da PI: 4.5187 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 139 | 190 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++ rW+A+I + k+++lg+++t+eeAa+a++ a+ +++g 678461261 139 SKYRGVTRHHNSARWEARIGLlH-----SkKYIYLGTYDTEEEAAAAYDMAAIEIRG 190 89****************99977.....45*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 0.0063 | 70 | 110 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.77E-6 | 76 | 105 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 9.15 | 76 | 104 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.9E-7 | 77 | 105 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.1E-12 | 139 | 190 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.15E-13 | 139 | 200 | No hit | No description |
SuperFamily | SSF54171 | 3.79E-18 | 139 | 200 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 7.7E-29 | 140 | 204 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.728 | 140 | 198 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.4E-19 | 140 | 199 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.9E-5 | 141 | 152 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.9E-5 | 180 | 200 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MTIIHNTGAQ TPKHHRYNGF VGETEPICDQ DDGALTYSFP ILRAPTRLCS CVAAANFHIC 60 SYRESLDLEE MQDVRAYAVE EDAARAYDLA ALKHWGRAAV LNFPAQVYGK EMEEMQKVNK 120 EVYLAHLKRN SSGFSRGTSK YRGVTRHHNS ARWEARIGLL HSKKYIYLGT YDTEEEAAAA 180 YDMAAIEIRG QNAVTNFEAS NYNYTEKLKG PHEADTTGLP SVYEQELQDD LQESSGSNAL 240 LCHEPEINSL DVSMMHGWDP CLVSASDVPL FSGDGMMMEE TSTLCTNTGF HDDGIFEWAF 300 GDQVINFNVS ETIGIGEMQH TSRRTASHDD QLIHVPELSP PNLLLSQGMG EMNPWNDLEP 360 DLFFDHTFNI SSFFDVMTYD DGTRA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678461261 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019449916.1 | 5e-54 | PREDICTED: ethylene-responsive transcription factor WRI1-like | ||||
TrEMBL | A0A1J7H6D5 | 1e-52 | A0A1J7H6D5_LUPAN; Uncharacterized protein | ||||
TrEMBL | A0A484KSM5 | 5e-53 | A0A484KSM5_9ASTE; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 1e-44 | ERF family protein |