PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678457126
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 300aa    MW: 33450.3 Da    PI: 4.2741
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678457126genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19110158254
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                +y+GVr++k +g+W+AeIrdp     + kr++lg++ taeeA  a++a r+++e
  678457126 110 KYRGVRRRK-WGKWAAEIRDPI----QhKRVWLGTYSTAEEASMAYEAKRLEFE 158
                8*****998.**********82....46**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.0E-12110158IPR001471AP2/ERF domain
CDDcd000181.17E-23110157No hitNo description
PROSITE profilePS5103219.612110169IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-17110157IPR016177DNA-binding domain
SMARTSM003809.6E-20110174IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-21110157IPR001471AP2/ERF domain
PRINTSPR003673.2E-10111122IPR001471AP2/ERF domain
PRINTSPR003673.2E-10133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MPGLRVSTPV PCYHEPMNRK LRLAAEARQK VKKIRFVCSD PYATDSSDDE MVNVKKMKRA  60
INEVCIVATD SPQKVPTCES SVNESSNGEK SIKKKCFATI ESNQDPETGK YRGVRRRKWG  120
KWAAEIRDPI QHKRVWLGTY STAEEASMAY EAKRLEFESM VDGSIDSLER SSNEDNRNDD  180
PAAASMPEDS CGSNQNPSEE ITTFEKKPVP SSCSMDEELM TLAETGTDID MGFELDSLLP  240
FDDMPMDDHL PIYDLGNLPD FSFDSDFGLD FDLEFGDCSE AVVSSFVDEI SGTPLNVACP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-141071511156Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678457126
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.12e-70ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G9HYF91e-66A0A2G9HYF9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.29e-29ERF family protein