PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678455562
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 94aa    MW: 10510.7 Da    PI: 6.2431
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678455562genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.65.1e-121445132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     rg WT+eEd +l  +++q+G+++W++I++  g
        678455562 14 RGQWTPEEDHKLSSYIAQHGTRNWRLIPKQAG 45
                     89**************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.8E-14543IPR009057Homeodomain-like
SuperFamilySSF466894.24E-9843IPR009057Homeodomain-like
PROSITE profilePS5129413.21962IPR017930Myb domain
PfamPF002494.4E-101445IPR001005SANT/Myb domain
CDDcd001671.77E-51745No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MGRIPCCEKD NVKRGQWTPE EDHKLSSYIA QHGTRNWRLI PKQAGESAAV WEELQAAVDE  60
LSPAGPETRS VFRGGGADNR HSAFSSWEQV AYLI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678455562
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A287IMV02e-26A0A287IMV0_HORVV; Uncharacterized protein
STRINGOS04T0470600-001e-28(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.13e-26myb domain protein 103