PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678455432
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 830aa    MW: 92212.2 Da    PI: 8.0327
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678455432genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.36e-12565589125
    G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                kprlrWt++LHerFv+av+qLGG++
  678455432 565 KPRLRWTSDLHERFVDAVTQLGGAN 589
                79*********************86 PP
2G2-like47.63.6e-156306592655
    G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +AtPk+i+++m+vkgLtl h+kSHLQkYRl
  678455432 630 EATPKAIMRMMGVKGLTLFHLKSHLQKYRL 659
                69***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578501.55E-1477147No hitNo description
Gene3DG3DSA:3.30.40.102.1E-1386144IPR013083Zinc finger, RING/FYVE/PHD-type
PfamPF136392.9E-988138IPR001841Zinc finger, RING-type
CDDcd001623.76E-1089139No hitNo description
PROSITE profilePS5008912.01790138IPR001841Zinc finger, RING-type
SMARTSM001841.1E-790137IPR001841Zinc finger, RING-type
SuperFamilySSF533002.67E-9272389IPR002035von Willebrand factor, type A
Gene3DG3DSA:3.40.50.4106.4E-8274387IPR002035von Willebrand factor, type A
Gene3DG3DSA:1.10.10.602.0E-28562590IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-9630660IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.0E-28631660IPR009057Homeodomain-like
SuperFamilySSF466893.76E-5631661IPR009057Homeodomain-like
PfamPF143793.0E-12700743IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 830 aa     Download sequence    Send to blast
MGGGRASNKF KNVAGKLFLR LRGSFCGGPI AVTVGRNVSP SSQNGCLKNP SETADPSTIS  60
PLNKVFPASL LVHLHLILYH FPFELEKNMC PICLDPLNYS SGGSPGEAIF TAQCSHSFHF  120
TCISSNVRHG SITCPICRAQ WTQLPRNLNI RGVVQLNNAD PVLRILDESI PSSRFHPRSF  180
LRSARYHEED PVVPDLTNEH PHLQFSLCGP WTRKGCSDLD PRVAGCCHSS GSSSMAGQEA  240
FQLSLKETYL RVRLEYWPST DLVLVACPDE PHLRTMKKGM ALVAFSLRPG DRLAIIINSS  300
AASRVFPLRR MSPFGKKAAL QAIDRLFYNG HADQTDGLNK AVKILSDRTH KNPQSCILHL  360
TNSSTSYHLP ATAFAEYQFS IHSFHLGLRL GDSDGLIMHQ FENILCRIMS GSIHDIQLSL  420
KNTPITIRLG ELRGGQEQRI RINIQECWPL HISYSFLNTR EGGGVRLGGE ALLSLPEKED  480
RDGNPVAAVT IGISGENREY RDPFMATTWA SHLHGRRLER AINNNICTPH EAIMSQETIQ  540
VSTIGGYGQR LPGEPCMVQL TSDPKPRLRW TSDLHERFVD AVTQLGGANS QHFSPPTFLF  600
FRNLYFWVFG LVLYMLLLSG FVISPFWALE ATPKAIMRMM GVKGLTLFHL KSHLQKYRLG  660
KQSGKEVGEA SNDGAFLEDS PGSNSPPQLA QTSEMNDGYQ VKEALRAQME VQTKLHLQVE  720
KHMQIRQDAE RRYLSMLEQA CKMLADQIIG GAEDLEGCSQ HGSKDTFNGS LHFQVPAYPP  780
QSAEAFVVPD HAEIRIPLNH QQQNADCSTE SCLTSHENLP PERALLGGKR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678455432
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095861.11e-150uncharacterized protein LOC105175201
TrEMBLA0A2G9GF091e-145A0A2G9GF09_9LAMI; Anaphase-promoting complex (APC), subunit 11
STRINGXP_006467242.11e-137(Citrus sinensis)
STRINGXP_006449970.11e-137(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.17e-54G2-like family protein