PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678454909
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 320aa    MW: 36448.5 Da    PI: 7.3139
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678454909genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-20178226355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                ++GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a++ a+ kl+g
  678454909 178 FRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDTAAYKLRG 226
                8******9.**********965...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.51E-32176234No hitNo description
PROSITE profilePS5103223.182177234IPR001471AP2/ERF domain
SMARTSM003802.1E-36177240IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-22177235IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-31177234IPR001471AP2/ERF domain
PRINTSPR003679.3E-11178189IPR001471AP2/ERF domain
PfamPF008471.9E-13178226IPR001471AP2/ERF domain
PRINTSPR003679.3E-11200216IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MRVPRDWIQL ECSKWALNSR NFWSENLLLG FIKKAIAMGL LFFILGPPPA APVVILSDFS  60
CWFHSRALIA SVRFFLVYVS GLRAREIRQK SLQRTLQALE PFMETSASNT TCDDFWSESE  120
SLAFSGVFSN QFTPSQVVES KAQFRPQKEN PNQGCSLRGP RAVTMKNHEK APKPMKLFRG  180
VRQRHWGKWV AEIRLPKNRT RLWLGTFDTA EEAALAYDTA AYKLRGDLAM LNFPLFQQHL  240
SQSTDFNPLS SSVDAKLQAI CQQQQQQQQQ QEGSSEGPSL CSETVKVEQQ PGDYPEPDIS  300
FLSLILENCP SFEIDWELCD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-21176235464ATERF1
3gcc_A2e-21176235464ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678454909
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019177314.11e-54PREDICTED: ethylene-responsive transcription factor RAP2-4-like
SwissprotO656658e-45ERF60_ARATH; Ethylene-responsive transcription factor ERF060
TrEMBLA0A2I0JTD56e-53A0A2I0JTD5_PUNGR; Uncharacterized protein
STRINGXP_004514265.14e-49(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16102471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65130.16e-35ERF family protein