PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678454719 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | NAC | ||||||||
Protein Properties | Length: 271aa MW: 30584.2 Da PI: 5.7189 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.6 | 1.5e-50 | 10 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lp+GfrFhPtdeelv++yL++k++++++ + +++e+++yk++PwdLp ++ +ekewyfFs+rd+ky++g+r+nr++ gyWkatg dk++ + ++v 678454719 10 LPAGFRFHPTDEELVMHYLCRKCASRSIGV-PIVAEINLYKYDPWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRSAGCGYWKATGADKPIGN--PKTV 106 799************************999.78***************6666689*************************************98..778* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+apkg+kt+W+mheyrl 678454719 107 GIKKALVFYSGKAPKGVKTNWIMHEYRL 134 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-61 | 4 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.919 | 10 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.2E-27 | 11 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence Send to blast |
MTTAAVDLQL PAGFRFHPTD EELVMHYLCR KCASRSIGVP IVAEINLYKY DPWDLPGMAL 60 YGEKEWYFFS PRDRKYPNGS RPNRSAGCGY WKATGADKPI GNPKTVGIKK ALVFYSGKAP 120 KGVKTNWIMH EYRLADVDRK KSNGSLRLDD WVLCRIYNKK GNIERQRGNK RPTTETTTTT 180 TDNDENEHVS VTTAAMAYDD CLYLDGSESI PSSSDHPSPE SASFQKAAES EWENFLLEGY 240 PDFQGYNPVD DTQDTIVGFS DYISKPFEIL A |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-79 | 4 | 165 | 9 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678454719 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069419.1 | 1e-117 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-104 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2G9HHN7 | 1e-115 | A0A2G9HHN7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.C01110.1.p | 1e-114 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-103 | NAC family protein |