PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678454687 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 16774.9 Da PI: 8.5103 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.8 | 7.5e-11 | 22 | 61 | 3 | 42 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 e ++ +r+++NRe+ArrsRqRK++ ++ L+ v+eL + 678454687 22 EKRKRKRMESNRESARRSRQRKQKHLDDLTAQVAELRRKK 61 5578899*****************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-12 | 20 | 84 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-8 | 22 | 60 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.151 | 22 | 85 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.5E-11 | 23 | 97 | No hit | No description |
SuperFamily | SSF57959 | 1.45E-9 | 24 | 73 | No hit | No description |
CDD | cd14702 | 1.03E-17 | 25 | 75 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 27 | 42 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MSHFSPEYRT LLTSSTSGSE GEKRKRKRME SNRESARRSR QRKQKHLDDL TAQVAELRRK 60 KAEITICVSS VTQRFIDVET ENSALKARMA ELTEALHYLN GILNFLDPHA ACGGACSIET 120 AEFQLHHADP GDGIIGSVGE LPTTARFFNI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 44 | RKRKRMESNRESARRSRQRKQK |
2 | 36 | 42 | RRSRQRK |
3 | 36 | 43 | RRSRQRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the DNA sequence 5'-ACTCAT-3' in target gene promoters. Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879). Positively regulates the expression of ASN1 and POX2/PRODH2 genes, which are involved in amino acid metabolism (PubMed:18088315). Regulates several metabolic pathways such as myo-inositol, raffinose and trehalose. Regulates several trehalose metabolism genes, including TRE1, TPP5 and TPP6 (PubMed:21534971). Mediates recruitment of the histone acetylation machinery to activate auxin-induced transcription. Interacts with ADA2B adapter protein to promote ADA2B-mediated recruitment of SAGA-like histone acetyltransferase complexes to specific auxin-responsive genes (PubMed:24861440). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:18088315, ECO:0000269|PubMed:21534971, ECO:0000269|PubMed:24861440}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678454687 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light (PubMed:9620274). Induced by hypoosmolarity (PubMed:15047879). Repressed by sucrose (at protein level) (PubMed:9721683, PubMed:15208401). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:15208401, ECO:0000269|PubMed:9620274, ECO:0000269|PubMed:9721683}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011083621.1 | 1e-34 | bZIP transcription factor 44 | ||||
Swissprot | O65683 | 3e-26 | BZP11_ARATH; bZIP transcription factor 11 | ||||
TrEMBL | S8D693 | 3e-32 | S8D693_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_010672920.1 | 7e-29 | (Beta vulgaris) | ||||
STRING | XP_006487251.1 | 5e-29 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA537 | 24 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34590.1 | 3e-26 | G-box binding factor 6 |