PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678454591
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 161aa    MW: 18895.5 Da    PI: 9.3543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678454591genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.12.4e-095291349
        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                +GV+++    +W A I++      +k+++lg+  + eeAa++++++
  678454591 52 MRGVYFKN--LKWQAAIKVD-----KKQIHLGTVASQEEAARLYDRY 91
               79***966..5********4.....5*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.96E-65191IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-45890IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
METTSGNGIY TSYVSVYSSS KAQLQHASMV PEIRRRKQHR RKRVENQEPC IMRGVYFKNL  60
KWQAAIKVDK KQIHLGTVAS QEEAARLYDR YCDIRYIKAD PLHDSLHFRA AFMCGREPNF  120
ELPEEEKQEL SKFSWDEFLE LTRVAINNKS EMSSKFQNQI G
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678454591
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022758728.12e-54ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758729.12e-54ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758731.12e-54ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758732.12e-54ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758733.12e-54ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP95e-39ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLM0T4P95e-49M0T4P9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P06510_0019e-50(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-41ERF family protein