PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678454281
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 194aa    MW: 21264.8 Da    PI: 10.0856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678454281genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.83.7e-1040711555
        AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               W+++         +kr++lg+f tae Aa+a+++a+  + g
  678454281 40 WFCR---------KKRIWLGTFETAEAAARAYDQAAVLMSG 71
               7766.........5*********************977766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.183179IPR001471AP2/ERF domain
SMARTSM003801.3E-102685IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-123980IPR016177DNA-binding domain
PfamPF008471.2E-54267IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-184280IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MGVVGCGNPP PAAVCSIGFT VGKYCIALKK CSDPFCVRAW FCRKKRIWLG TFETAEAAAR  60
AYDQAAVLMS GHSAKTNFPD DEMNTAAFSS ASTLSSTLGA KLRKSCKNPA PSLACLRLDT  120
DDSNIGVWQK RAGRQSGSHW VMKMELKNKV FCPPHPSTRK NENKILLVYK STLLWITHPI  180
QSISILNLQK QSVV
Functional Description ? help Back to Top
Source Description
UniProtPromotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15319479}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678454281
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves. {ECO:0000269|PubMed:15319479}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016477230.11e-42PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ3E9584e-39SHN3_ARATH; Ethylene-responsive transcription factor SHINE 3
TrEMBLA0A4D8ZSK52e-46A0A4D8ZSK5_SALSN; Uncharacterized protein
STRINGXP_009758054.17e-41(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.26e-27ERF family protein
Publications ? help Back to Top
  1. Djemal R,Khoudi H
    Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum).
    Protoplasma, 2015. 252(6): p. 1461-73
    [PMID:25687296]
  2. Sadler C, et al.
    Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition.
    Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344
    [PMID:26965486]