PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678453354
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 349aa    MW: 38494 Da    PI: 6.8501
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678453354genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47.1e-10176223455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++Y++sLq
  678453354 176 SHSLAERVRREKISERMKFLQDLVPGC----DKITGKAAMLDEIINYVQSLQ 223
                8*************************9....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.77E-12170227No hitNo description
SuperFamilySSF474598.9E-16170233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16172236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.751172222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-7176223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-10178228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MNRALQESNW QEFIEVEKIL NGDDAFWGLN EDQVVGGGLM KSGHTFFCDE LQAVLNSGGA  60
SQSQSESCYS IQRTLSCPIA GDVAGVGSSQ RKRKAETLKE EVDVKMEKKK MKVYEEEESK  120
FSEQNSNCNS KSTTTAADSC RKHPAASKSD SNSKGGDAPK TDYVHVRARR GQATDSHSLA  180
ERVRREKISE RMKFLQDLVP GCDKITGKAA MLDEIINYVQ SLQRQVEAQS RHGRQSAQRG  240
NRYILSDPLR SSLNRFSILP SSEVNNSGVH FHLHPVVQMP MGVTVNTSDS GLHGGLSVPL  300
TIPDPFIDSH AQQFSWGNEM ENPFASSFLP RTFTGEGFMG AGNVKLEMP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190111RKRKAETLKEEVDVKMEKKKMK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678453354
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-41cryptochrome-interacting basic-helix-loop-helix 1