PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678451052
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 176aa    MW: 19159.4 Da    PI: 9.3066
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678451052genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.8e-1655105155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +++kGVr +k +g+Wv+eIr+p   g +  r +lg++ ++e Aa a++ a  +l+g
  678451052  55 TKFKGVRSRK-WGKWVSEIRVP---G-TpDRLWLGTYSSPEAAAVAHDVAQYCLRG 105
                69*****888.**********8...3.58*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.2E-955105IPR001471AP2/ERF domain
CDDcd000181.23E-2355115No hitNo description
SuperFamilySSF541712.03E-1656115IPR016177DNA-binding domain
SMARTSM003802.6E-2756121IPR001471AP2/ERF domain
PROSITE profilePS5103220.45556115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-2456115IPR001471AP2/ERF domain
PRINTSPR003671.7E-75768IPR001471AP2/ERF domain
PRINTSPR003671.7E-77995IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MTPPAFEVFL RLTLLQTQPI YTIFSQLDTT SRSSPGNSTA QHNAGKAMSS HDASTKFKGV  60
RSRKWGKWVS EIRVPGTPDR LWLGTYSSPE AAAVAHDVAQ YCLRGGDSSQ RFNFPLVLPA  120
GARYGLSPRS VQRAASDAGM AVDARLRDSK ESGQQMYGGS YSGASEYLDI SVDDYL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678451052
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.19e-57PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotO805421e-36ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLS8CMM18e-56S8CMM1_9LAMI; Uncharacterized protein
STRINGMigut.C01360.1.p4e-56(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-38ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]