PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678448878
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family HD-ZIP
Protein Properties Length: 722aa    MW: 79389.8 Da    PI: 6.5584
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678448878genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.6e-1951104356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                k  ++++ q++eLe++F+kn++p+++ r eL k+lgL+ rqVk+WFqNrR++ k
  678448878  51 KYYRHKSFQIQELENYFKKNPHPDEKGRLELGKRLGLESRQVKFWFQNRRTQLK 104
                55678899******************************************9987 PP
2START1381e-432544692203
                HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S...EEEEEEEECTT. CS
      START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla...kaetlevissg. 88 
                la +a++el+k+ ++++p+W k      e +n de+ + f +  +     + +ea ra+g  +  +  lve l++++ qW e+++     +  +vi+sg 
  678448878 254 LAMSAMEELMKLSQLADPLWLKRLdenvEFLNLDEYAKAFMPCIGmkpkhFMSEATRATGTAFISSSALVEALMNVS-QWMEMFPrniGRASFDVICSGm 352
                67899******************99999999*********99888999999**************************.*******998556789999999 PP

                .....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHH CS
      START  89 .....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllr 182
                     g+l+l++ae+q+lsplvp R   f+R+++q+g+g w++vdvSvd+  + ++      +++lpSg+++++++ng+skvtw eh++++++++h l++
  678448878 353 pgnwdGVLHLIQAEFQVLSPLVPtRVAKFIRFCKQHGEGMWAVVDVSVDHLLPGQQ----GNCRRLPSGCIVQDLQNGYSKVTWTEHTEYNENTVHHLFQ 448
                99****************************************************95....67778*********************************** PP

                HHHHHHHHHHHHHHHHHTXXX CS
      START 183 slvksglaegaktwvatlqrq 203
                +l++sg a ga++w+  lq q
  678448878 449 PLIQSGKALGAQKWLFDLQMQ 469
                **************9888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-1838106IPR009057Homeodomain-like
SuperFamilySSF466896.42E-1839106IPR009057Homeodomain-like
PROSITE profilePS5007117.10346106IPR001356Homeobox domain
SMARTSM003893.5E-1648110IPR001356Homeobox domain
CDDcd000862.98E-1749106No hitNo description
PfamPF000463.0E-1651104IPR001356Homeobox domain
PROSITE profilePS5084831.317244471IPR002913START domain
SuperFamilySSF559615.08E-23247467No hitNo description
CDDcd088751.03E-92248471No hitNo description
SMARTSM002346.7E-24253472IPR002913START domain
PfamPF018522.4E-36254468IPR002913START domain
SuperFamilySSF559613.02E-17498708No hitNo description
Gene3DG3DSA:3.30.530.203.9E-4514577IPR023393START-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    Send to blast
MEDFGEIGFT GGPLGSTFMK GKGDVANSKP ENDHLGAASG DASKKTSNKE KYYRHKSFQI  60
QELENYFKKN PHPDEKGRLE LGKRLGLESR QVKFWFQNRR TQLKTQLERH ENINLKQENE  120
KLCHENILLC EAMRNPICKG CGGPAVLREV APEQIHLLIE NARLKDELER LGIVVSKFLN  180
GADGSMSPFG SFSKSDLDAG RNSFFGLNTR DLMFPLGLEL GTRVSNSFSP LPSSVAGLGA  240
ANVDTPDKSM FLELAMSAME ELMKLSQLAD PLWLKRLDEN VEFLNLDEYA KAFMPCIGMK  300
PKHFMSEATR ATGTAFISSS ALVEALMNVS QWMEMFPRNI GRASFDVICS GMPGNWDGVL  360
HLIQAEFQVL SPLVPTRVAK FIRFCKQHGE GMWAVVDVSV DHLLPGQQGN CRRLPSGCIV  420
QDLQNGYSKV TWTEHTEYNE NTVHHLFQPL IQSGKALGAQ KWLFDLQMQS ELPFAIMNSR  480
GNQPELPPSG KTSIAMLAQR MMRGFCSGIC ATIHQWEMVQ HSDDTTLMTR KSNSNDGESP  540
GVILSASTTV RVPVPPRLLL DFLQNEKTRA HWDALSEDGL MQQVLQIFKG QEQDSGNSIS  600
LLQARVPSLN ASPSSMLVLQ ETCTDISGSL FVNAPIDSVS MNVVMNGGDP SGVPILPSGF  660
AIAPDCSSNS AGQEGSLLTL GFQILVNSLP AAKLTMESVE TVRSLIARRL HGIKTGLGLA  720
GI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678448878
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076208.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLS8E4980.0S8E498_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.F00362.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0homeodomain GLABROUS 1