PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678448546 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 316aa MW: 34827.8 Da PI: 10.0158 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 147 | 197 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g 678448546 147 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAAHLCLKG 197 59*****998.**********9...336*********************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.25E-17 | 147 | 209 | No hit | No description |
PROSITE profile | PS51032 | 20.363 | 148 | 207 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.3E-26 | 148 | 207 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-16 | 148 | 207 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.6E-11 | 148 | 197 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.9E-30 | 148 | 213 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-8 | 149 | 160 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-8 | 171 | 187 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence Send to blast |
MMKKKKQETG QGVGVWGPAI RKLALAGASL PPSLPRQPCA VLTDLDVHLH AIIRTGKVRC 60 PGASPFIRIP PCARWVIATP HRHAKKLILC SHLTPDPNQA SHHTLLLATS SSLFVRSIIV 120 VGKETHLPTM VKGETKVPQA EPQMKKKKYK GVRMRSWGSW VSEIRAPNQK TRIWLGSYST 180 PEAAARAYDA AHLCLKGYSS STSRNFQVSS DQFLSSHLQK TAMSPKTIQR VAAAAAADTG 240 YQGLVPEPAS SSSDPTPTRL HSEEKRSADR EELSWFSFDS PNYYDTTLNG AFFDPHPMDM 300 EDSLEDGGDI SLWSFR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678448546 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006386376.1 | 2e-37 | ethylene-responsive transcription factor ERF014 | ||||
Refseq | XP_012853346.1 | 4e-37 | PREDICTED: ethylene-responsive transcription factor ERF014 | ||||
TrEMBL | A0A2Z7BEZ9 | 6e-40 | A0A2Z7BEZ9_9LAMI; Uncharacterized protein | ||||
STRING | POPTR_0002s08610.1 | 8e-37 | (Populus trichocarpa) | ||||
STRING | Migut.N03295.1.p | 2e-36 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 6e-31 | ERF family protein |