PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678447630

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

bHLH

Protein Properties

Length: 291aa MW: 31815.6 Da PI: 7.3584

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678447630	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.3	2e-06	111	133	33	55
.TTS-STCHHHHHHHHHHHHHHH CS HLH 33 apskKlsKaeiLekAveYIksLq 55 + s+K +Ka++L +A+eY+k+Lq 678447630 111 NLSEKTDKASMLDEAIEYLKQLQ 133 5689******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	6.6E-7	111	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.13E-7	111	158	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.50E-6	113	137	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MWDLYGNNES GDMSSFLQIL LQNSSSSPNN HDGNTAASSV FISGGIKAES SSSSINFPGP 60 NSFFTGDSER MNSMKHVLGS SPEGSDSFDA AVPCSAPLRS SKRTRAAEVH NLSEKTDKAS 120 MLDEAIEYLK QLQRQVQILT VRNGLSLHPA HSLGTPQSML SSSAVQEPHT RDDNVFVQRL 180 PESNVADSST APNCMTSMAN TTSSGIIPQF VPPTQIQYGM LNHLNSTQVS LSCTHCLKLD 240 RKLNSHPYII HCCTGYLPGR HRFSTAVRFK LVWEQHVSWR VLVMKPNSTG D

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678447630

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074391.2	2e-47	transcription factor ALC-like
TrEMBL	A0A2G9HK73	2e-58	A0A2G9HK73_9LAMI; Uncharacterized protein
STRING	Migut.C00561.1.p	2e-40	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7543	23	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-17	bHLH family protein