PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678447615 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 303aa MW: 34277 Da PI: 4.9348 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.2e-17 | 104 | 155 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I r k+++lg++++ eeAa+a++ a+ +++g 678447615 104 SKYRGVARHHHSGRWEARIGLmH-----RkKYIYLGTYDSQEEAAAAYDIAAIEIRG 155 89****99**********99966.....45*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 6.1E-4 | 19 | 75 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.5E-8 | 31 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-7 | 32 | 70 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 10.112 | 40 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.83E-18 | 104 | 165 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 8.3E-12 | 104 | 155 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.17E-11 | 104 | 165 | No hit | No description |
SMART | SM00380 | 3.8E-30 | 105 | 169 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.6E-20 | 105 | 164 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.439 | 105 | 163 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-5 | 106 | 117 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-5 | 145 | 165 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence Send to blast |
MLTGVNEDFA LFAYLYENQG VAYYKVKPLR KKNWLGGCPG AYDVEEQAAR AHDLAALKYW 60 GGAAILNFPI RTYGKELEEM QKVNKEAYLA NLKRQSSGFS RGASKYRGVA RHHHSGRWEA 120 RIGLMHRKKY IYLGTYDSQE EAAAAYDIAA IEIRGPNAVT NFEVSNYAEK EKLISDRFEA 180 PAQATQEAAS TWDTTHLLHN NEHVEGLRSL DSGISDPCLD NAFDIQHLFD WAFEEDATNL 240 GIGKTQGNSE ETRKSHESGL SSVDWVWPQG KSEVNPRNDE AWLDTATFDI SWWMVDEEEI 300 TLV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678447615 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019453469.1 | 5e-63 | PREDICTED: ethylene-responsive transcription factor WRI1-like | ||||
Refseq | XP_019465169.1 | 7e-63 | PREDICTED: ethylene-responsive transcription factor WRI1-like | ||||
TrEMBL | A0A4P1R0G5 | 3e-62 | A0A4P1R0G5_LUPAN; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 1e-53 | ERF family protein |