PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678441318
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 404aa    MW: 44208.3 Da    PI: 4.0102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678441318genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-16101148253
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                +ykGVr++k +g+++AeIrdp++   rkr++lg++ t+eeA  a++a r+++
  678441318 101 KYKGVRRRK-WGKFAAEIRDPVT---RKRIWLGTYLTPEEASVAYEAKRLEF 148
                8*****998.**********765...5**********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.33E-15101148IPR016177DNA-binding domain
CDDcd000181.08E-19101153No hitNo description
PfamPF008472.9E-9101149IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-19101148IPR001471AP2/ERF domain
PROSITE profilePS5103218.162101163IPR001471AP2/ERF domain
SMARTSM003801.8E-17101161IPR001471AP2/ERF domain
PRINTSPR003671.6E-7102113IPR001471AP2/ERF domain
PRINTSPR003671.6E-7124140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MPTLSNETSR KTRSESATMK IRIICSDPYA TESSDDDEPS QRRKDNKFVV VYEGSLAAAS  60
TDCDTSVEDS NYVDVEINQK GSILKKAGEI KAAPGEFVSG KYKGVRRRKW GKFAAEIRDP  120
VTRKRIWLGT YLTPEEASVA YEAKRLEFNA LRNSNHPASD SCPEKSSKKL KHHSDDETAA  180
ASDASIDSVE TQVSHTYPSA LESPISGYHT KGAVVTLAAY ADSETVATSE EDLNDFSMMD  240
EDMDLGLELD YSTYIPSNFS LDNIFDDLPG DLDNGVLWNS TGLPCSPIDD LPPYSDTSDD  300
LRTGAGAALP DSLSSDIGNL SQELLVADPA APEYTPIVDD DFMADPTAFE CSYMDDSTAF  360
PGLDDIVRDF QTGCFNFGDD DLNSNALRDF DNLDLEWINS VVPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102108KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678441318
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.27e-21ERF family protein