PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678440158
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 301aa    MW: 32919.6 Da    PI: 4.3917
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678440158genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18105153254
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                +y+GVr+++ +g+W+AeIrdp     + kr++lg++ t++eA  a++a r ++e
  678440158 105 KYRGVRQRR-WGKWAAEIRDPI----QrKRVWLGTYNTPQEASNAYEAKRMEFE 153
                8*****998.**********83....35**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.9E-21105151IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-16105152IPR016177DNA-binding domain
PROSITE profilePS5103219.019105171IPR001471AP2/ERF domain
PfamPF008473.4E-12105153IPR001471AP2/ERF domain
SMARTSM003801.3E-17105175IPR001471AP2/ERF domain
CDDcd000181.45E-21105147No hitNo description
PRINTSPR003672.6E-9106117IPR001471AP2/ERF domain
PRINTSPR003672.6E-9128144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MLRFGNPGSV LNETQSFKRS SHHESGVVSL KKLRVICSDP YATDDSSDDE EPHTQRKSKA  60
VIIHEVCLST PAETEPSDQD NNFVEKQHLK KPLPLLEAKP GVGGKYRGVR QRRWGKWAAE  120
IRDPIQRKRV WLGTYNTPQE ASNAYEAKRM EFESLINGGC SPETKQNVDF AVSVSEISSE  180
SETTGSQESS HTSPSSLGHE MESPKMCNEA PLAALPVDEE LMAFIAGDFD LDLGLQSLLE  240
LDGFGEEGNA LDGLPLSGFH GTEIGSSLPD FDFDLDECFM DWMDINPVPG ISSGGGACVL  300
V
Cis-element ? help Back to Top
SourceLink
PlantRegMap678440158
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.11e-55ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G9GJ628e-52A0A2G9GJ62_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.29e-29ERF family protein