PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678440020 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 256aa MW: 28243.6 Da PI: 5.7647 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.2e-17 | 90 | 136 | 4 | 54 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +GVr++k +g+W+AeIrdp + kr +lg++ taeeA ka++ r++l+ 678440020 90 RGVRQRK-WGKWAAEIRDPI----QqKRLWLGTYNTAEEASKAYESKRRELK 136 8*****9.**********82....36**********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 4.3E-32 | 8 | 242 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
SMART | SM00380 | 2.3E-16 | 88 | 150 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.716 | 88 | 147 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-8 | 89 | 100 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.59E-21 | 90 | 128 | No hit | No description |
Pfam | PF00847 | 6.5E-11 | 90 | 136 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-20 | 90 | 136 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-15 | 90 | 135 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.0E-8 | 111 | 127 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MPALGNRSPC IQEDMNKKKR FKPETRQSVR KIKIICSDPY ATDSSDDDQP PGKKRKDIIN 60 EVCISAACPV LKPPESRSRP KPFSDIGKGR GVRQRKWGKW AAEIRDPIQQ KRLWLGTYNT 120 AEEASKAYES KRRELKALSD EIFSNLDVHS LAPCNTNASF PSSAPDTDSS AAKPLSGSGL 180 IPGIKGDTNL ELEFSSLLSE HDFATPFDDF TLADLPLYST EDDGVHPSSL LHSSFDSDFN 240 FSSVCGESFP LPFDAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 15 | 22 | NKKKRFKP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678440020 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G9GJ62 | 6e-37 | A0A2G9GJ62_9LAMI; Uncharacterized protein | ||||
STRING | Migut.E00335.1.p | 5e-31 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2957 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 6e-24 | ERF family protein |