PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678436573
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB
Protein Properties Length: 1082aa    MW: 121349 Da    PI: 7.4325
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678436573genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-08499543246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g+W  eEd+ l++ ++q G  +W  Ia+ +g+ Rt+ qc  r+q 
        678436573 499 GPWNSEEDKNLLHIIQQRGLSNWIEIAASLGTSRTPFQCLARYQR 543
                      89*****************************************96 PP
2Myb_DNA-binding45.12.3e-14551597148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +  WT+eEd +l +avk++G+ +W ++a+ +  gRt+ qc  rw+k l
        678436573 551 KSEWTKEEDRQLREAVKKFGTSDWQLVASVIE-GRTGTQCSTRWLKTL 597
                      578*****************************.***********9975 PP
3Myb_DNA-binding49.87.7e-16605648246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      grW++eE ++l  av ++G+  W++Ia++++ gRt+ qc++rw +
        678436573 605 GRWSEEEKKRLEVAVMLFGPQAWNKIASCVP-GRTGVQCRERWSN 648
                      8******************************.***********87 PP
4Myb_DNA-binding36.11.5e-11658699346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +W+ eEd +l  a+ ++G   W+++a +++  Rt+ qc  rw  
        678436573 658 PWSDEEDRKLEAAISKHGYC-WAKVALCIP-PRTRSQCLRRWKV 699
                      7*****************99.*********.9**********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0087398494IPR001005SANT/Myb domain
PROSITE profilePS500905.947399492IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.606.0E-11401417IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-11465504IPR009057Homeodomain-like
SuperFamilySSF466892.27E-16473542IPR009057Homeodomain-like
PROSITE profilePS500909.57493545IPR017877Myb-like domain
SMARTSM007174.8E-6497547IPR001005SANT/Myb domain
PfamPF002492.1E-7499543IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.8E-13505551IPR009057Homeodomain-like
SuperFamilySSF466899.66E-21530601IPR009057Homeodomain-like
PROSITE profilePS5129421.454546601IPR017930Myb domain
SMARTSM007171.5E-15550599IPR001005SANT/Myb domain
PfamPF002492.7E-13551596IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-16552602IPR009057Homeodomain-like
CDDcd001677.32E-13553597No hitNo description
SuperFamilySSF466898.8E-23603697IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-16603650IPR009057Homeodomain-like
SMARTSM007172.7E-13603652IPR001005SANT/Myb domain
PROSITE profilePS5129411.697603650IPR017930Myb domain
PfamPF002492.3E-14605648IPR001005SANT/Myb domain
CDDcd001671.25E-11606648No hitNo description
PROSITE profilePS5129419.638651705IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-12651699IPR009057Homeodomain-like
SMARTSM007171.3E-11655703IPR001005SANT/Myb domain
PfamPF002493.5E-10658699IPR001005SANT/Myb domain
CDDcd001674.42E-11658700No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1082 aa     Download sequence    Send to blast
MASDRAEFQR IHHYETQYQD DDGETWGAQL QSPLLHLRLR RGILLKIETL EVKRIDSRCG  60
RFGRSNADTF GGRAMESDSD DDSFVEDMEA LKRACYLVRT DAAADSIQPP SGDGVVSAVN  120
AAEKVEEDES NGEEDHDTQL LQSIQDRFFF SVGLMEPLRR RRMASSTLDS DYSDSDDDYE  180
TLRAIHRRFA AYDDGGLKNI TSDVLQGPEQ VGAPILDSIK ETSNSSVERS NAREGFVNCV  240
DICKPISQKE AYDGANGSQS SDLVERDRHA DDLALIPSEH SHFPDSALTF FDAIKKNRSY  300
QKLIRGKMIQ MESRIEELRK LTERVKVLKD FQLACKKRTG RALSQKKDDR IQLISKRKAM  360
ENLKADDKKL SVMCKGPPEN PHVANYRQAL MAFGIPLCRK SWSEKERENL VKGVKQQFQE  420
LLLCRSVDLI SEEDGSANPT DLDSVLLSIK HVEITPERIR SFLPKVKWEQ LAAMYLPGRT  480
GDECQTRFLN FEDPLINHGP WNSEEDKNLL HIIQQRGLSN WIEIAASLGT SRTPFQCLAR  540
YQRSLNASII KSEWTKEEDR QLREAVKKFG TSDWQLVASV IEGRTGTQCS TRWLKTLHPA  600
KERQGRWSEE EKKRLEVAVM LFGPQAWNKI ASCVPGRTGV QCRERWSNCS NPSLTVAPWS  660
DEEDRKLEAA ISKHGYCWAK VALCIPPRTR SQCLRRWKVL YPDDARRRQE ARKMQKVALI  720
SNFVDREKEK PNLRPTDFIM PVTLAIGSSC SEPSQQKKRK SRSKKANNDA EKGHLSRENG  780
CNEVPMLTDR IEIENSASAT EPPARSGKRT ASKKQKVDPS CTHLQPGPNM SVLEMPNAER  840
MNSFAGESNG TPSRNRSECA GESRGLPSRR SSESANTNPL CDARERIIES NTCASEAIAQ  900
QEPEREDDGE VRPSSCANTS LLNYQIVEQS TTGAKAQGKF ITVDRETCSG GATTPSADLD  960
CSTPTSAPTD ISIKDGDDRG RSLSSKLSLA PYHPSEESTL TVSNDSAAFA GWQSDSGTLP  1020
QLQNGETHPP RRKVGSKTKK KSGIRPHPGS SSCDHHKKAQ QTEDEVGDDT LLSEFYSRIK  1080
RK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C5e-304706976155MYB PROTO-ONCOGENE PROTEIN
1h89_C5e-304706976155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678436573
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084456.10.0uncharacterized protein LOC105166700 isoform X1
RefseqXP_020552481.10.0uncharacterized protein LOC105166700 isoform X1
RefseqXP_020552485.10.0uncharacterized protein LOC105166700 isoform X1
TrEMBLA0A2G9HYB10.0A0A2G9HYB1_9LAMI; Uncharacterized protein
STRINGMigut.D01451.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA108762124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-168myb domain protein 4r1