PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678435992
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 189aa    MW: 20167 Da    PI: 11.0947
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678435992genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.6e-2056104355
        AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr ++ +grW AeIrd       r r++lg+f+tae+Aa+a++aa+++l+g
  678435992  56 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEDAARAYDAAARRLRG 104
                9*******.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.3E-3355118IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-2255113IPR016177DNA-binding domain
PROSITE profilePS5103222.98555112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-3055112IPR001471AP2/ERF domain
PRINTSPR003671.1E-105667IPR001471AP2/ERF domain
CDDcd000184.60E-1656113No hitNo description
PfamPF008471.5E-1356104IPR001471AP2/ERF domain
PRINTSPR003671.1E-107894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MMANNLTFLP FSPEPPLLEG IAAVVGEHVL FGHSAAAQKP LKDASATTPI GVTKAYRGVR  60
KRPWGRWSAE IRDRIGRCRH WLGTFDTAED AARAYDAAAR RLRGSKARTN FPIPSVVPVS  120
EPSSSSSSSK KKKSGGGGAV RSNGGKKCRV VTSVAHLFGP NLNPNPSVEI ETGVSLELGL  180
KTAFFNAKQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1854113464ATERF1
3gcc_A2e-1854113464ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678435992
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004305488.19e-53PREDICTED: ethylene-responsive transcription factor ERF084
SwissprotQ9M8M53e-27ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A1Q3BSP56e-55A0A1Q3BSP5_CEPFO; AP2 domain-containing protein
STRINGXP_004305488.14e-52(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-22ERF family protein