PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678431222 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bHLH | ||||||||
Protein Properties | Length: 204aa MW: 22238.4 Da PI: 8.7639 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.5e-13 | 37 | 83 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+e+ErrRR+riNs + +L+++lP+ K +Ka+ L +Av+ +++L 678431222 37 NSHKEAERRRRKRINSHITTLKSILPNV-----VKTDKASLLGEAVRRVREL 83 68*************************7.....6************998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.415 | 34 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.0E-13 | 37 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.3E-10 | 37 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.45E-4 | 38 | 86 | No hit | No description |
SuperFamily | SSF47459 | 1.96E-13 | 38 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.4E-11 | 40 | 89 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF55021 | 2.09E-7 | 121 | 188 | No hit | No description |
CDD | cd04873 | 1.16E-5 | 123 | 166 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 2.4E-6 | 123 | 183 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MFSAANAHGQ VSFSDGYMIG SGSFCPGVMD EAPASSNSHK EAERRRRKRI NSHITTLKSI 60 LPNVVKTDKA SLLGEAVRRV RELNKAAAEL STLNFYFPGE TDEVAVCRCE GNGDDNPGLV 120 KATLCCEDRP EMVVDLMQAL QSVEANLVRA EMSTIGGRTM SVLWVRLRAN DDAGVVTLKR 180 ALKIVMDKSG QAFPVSKRIR HSPS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678431222 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097486.2 | 2e-57 | transcription factor bHLH30-like | ||||
TrEMBL | A0A2G9G238 | 2e-68 | A0A2G9G238_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H02300.1.p | 7e-52 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7283 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 5e-38 | bHLH family protein |