PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678429649
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 427aa    MW: 46650.1 Da    PI: 6.7746
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678429649genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-10231289563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+   + l++e+
  678429649 231 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTSGLTAEN 289
                9**********************************************999888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-16227291IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909229292IPR004827Basic-leucine zipper domain
PfamPF001705.5E-9231287IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.82E-11231282No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-10231285No hitNo description
CDDcd147037.12E-26232281No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MEKDKSHHGS NSLLPPLGRY SVFSPPGSSY GVKSEQLGQS NLPPLGPGSS SDQGHFGHGM  60
NSVSSHFSHD ISQMPDNPPK KMGHRRAHSE IITLPDDISF DSDLGVVGGF EGPSFSDETD  120
EDMFSMFLDM DKLNSASATS ALHIGESSSS AAELGNASTP TIPISGQSLD NVASGLSEKP  180
RIRHQHSQSM DGSTSIKPEM LMSGSEDISP ADTKKAVSAA KLAELALIDP KRAKRIWANR  240
QSAARSKERK MRYIAELERK VQTLQTEATS LSAQLTLLQR DTSGLTAENS ELKLRLQTME  300
QQVHLQDALN DALKEEIHHL KVLTGQTIAN GGNVMNLSAS FGANQQYFGN NHAMHTLLTA  360
QQLQQLQIHP QKKPQQFQPH QLHPFQQQQQ LPQLSLQRQE LQLQQVGDGK LRNTMPSSSH  420
KDLAPDA
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678429649
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091638.10.0probable transcription factor PosF21
RefseqXP_011091639.10.0probable transcription factor PosF21
SwissprotQ040881e-141POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2G9GFX20.0A0A2G9GFX2_9LAMI; Uncharacterized protein
STRINGEMJ235790.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-150bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]