PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678428415
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 298aa    MW: 31758.7 Da    PI: 6.8923
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678428415genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.41.1e-37651712104
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.....kaaksaa 95 
                a++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++  +++ +  +s   s+     +aa++  
  678428415  65 APAKRSNKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVsVDGALRIPTS--PSPaaaesSAASEVG 162
                789*************************************************************7777744421111111111..111222111111111 PP

        TCP  96 kskksqksa 104
                k++++++s+
  678428415 163 KKRRKRASN 171
                222222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.3E-3070155IPR005333Transcription factor, TCP
PROSITE profilePS5136927.40471125IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0031347Biological Processregulation of defense response
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MEPIHQTSHN ESLQSPRDES ADPLLRREDS IAALETPPPE DGTVKEEPSD VDLFAASGSI  60
QHLGAPAKRS NKDRHTKVEG RGRRIRMPAA CAARIFQLTR ELGHKSDGET IRWLLERAEP  120
AIIEATGTGT VPAIAVSVDG ALRIPTSPSP AAAESSAASE VGKKRRKRAS NSDSYEVNDP  180
SRFAPITPVA PHGLVPVFPN GAFFMIPPGG GGPSSQPQFW AIPATATPVF NVAARPMSNA  240
ITFAPPTAEH GGATEMVRGD ISLNIYDENK KELQLLGGDK SDKLEQTPSP KACGKKDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162166KKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678428415
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076261.11e-106transcription factor TCP19
SwissprotQ9LT892e-67TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A2Z7BA001e-101A0A2Z7BA00_9LAMI; Uncharacterized protein
STRINGMigut.F00395.1.p3e-95(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.24e-63TCP family protein