PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678425144
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 338aa    MW: 37781.7 Da    PI: 9.5953
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678425144genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.7e-114084246
               XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
               ++ k+ rr+++NReAAr+sR+RKka++++Le    +L++  ++L+
  678425144 40 RDQKVLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 84
               577999*************************98888887776554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-93688No hitNo description
SMARTSM003383.3E-53997IPR004827Basic-leucine zipper domain
PfamPF001701.2E-74184IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3814185IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-74389No hitNo description
PROSITE patternPS0003604661IPR004827Basic-leucine zipper domain
PfamPF141441.4E-31137211IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MTSSPRTDTS TDADTQDKSL RFKSNQLQAS VASDGSDKSR DQKVLRRLAQ NREAARKSRL  60
RKKAYVQQLE SSRMKLTQLE QELQRARQQV LLSFLDMQLP GVYISSSGDQ SQANGGNGAL  120
PFDVEYARWL EDHNRRINEL RGAVNSHAGD AELRIIVEGI LAHYDEVFRI KGDAAKADVF  180
HILSGMWKTP AERCFLWLGG FRSSELLKLL MNHLEPLTEQ QLLAINSLQQ SSQQAEDALS  240
QGLEALQQSL GETLAGSLSP SGSSANVANY MGQMAMAMGQ LGTLEGFIRQ ADNLRQQTLQ  300
QMHRILTTRQ SARALLAMSD YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678425144
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075851.10.0transcription factor TGA2.2
RefseqXP_011075852.10.0transcription factor TGA2.2
RefseqXP_011075853.10.0transcription factor TGA2.2
RefseqXP_011075855.10.0transcription factor TGA2.2
RefseqXP_011075856.10.0transcription factor TGA2.2
RefseqXP_011075857.10.0transcription factor TGA2.2
RefseqXP_020549248.10.0transcription factor TGA2.2
RefseqXP_020549249.10.0transcription factor TGA2.2
RefseqXP_020549250.10.0transcription factor TGA2.2
RefseqXP_020549251.10.0transcription factor TGA2.2
SwissprotQ415581e-177HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A068UNV80.0A0A068UNV8_COFCA; Uncharacterized protein
STRINGMigut.F00128.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-139TGACG motif-binding factor 6