PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678424588
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 287aa    MW: 31588.4 Da    PI: 4.5101
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678424588genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-18101149254
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                +y+GVr+++ +g+W+AeIrdp     + kr++lg++ t++eA +a++  r+++e
  678424588 101 KYRGVRQRR-WGKWAAEIRDPI----QrKRVWLGTYNTPQEASRAYETKRLEFE 149
                8*****998.**********83....35**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.37E-16101148IPR016177DNA-binding domain
SMARTSM003801.9E-18101155IPR001471AP2/ERF domain
PfamPF008472.7E-12101149IPR001471AP2/ERF domain
CDDcd000189.71E-23101141No hitNo description
Gene3DG3DSA:3.30.730.101.6E-21101147IPR001471AP2/ERF domain
PROSITE profilePS5103219.216101158IPR001471AP2/ERF domain
PRINTSPR003678.0E-10102113IPR001471AP2/ERF domain
PRINTSPR003678.0E-10124140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MPRFRNPSSL FKETRSLKRN TQPASSISMK KLRVICSDPY ATDDSSDEEE PYMQRNPKAV  60
IIHEVCLSAP ETESSDQDSN YADKPPKKPF PFLAKPSIAG KYRGVRQRRW GKWAAEIRDP  120
IQRKRVWLGT YNTPQEASRA YETKRLEFES LINSGCSPEK SKCAVTVSEV SSEGEAIGSQ  180
GSQTPSSLSL EMNSPKMCNE VTLADEELLA FIAGDYDLEE GLLSILEVDG FGEEGNAVDG  240
LPVCGFNGME TGSSLPDFDF DLGECFMHWM DGNSVPAITG GGTCVLV
Cis-element ? help Back to Top
SourceLink
PlantRegMap678424588
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.18e-58ethylene-responsive transcription factor ERF118-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-31ERF family protein