PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678424138
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 296aa    MW: 32428.9 Da    PI: 4.2628
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678424138genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.8e-2094142254
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                +y+GVr++k +g+W+AeIrdp     + kr++lg++gtaeeA +a++  r ++e
  678424138  94 KYRGVRQRK-WGKWAAEIRDPI----QhKRVWLGTYGTAEEASRAYESKRIEFE 142
                8*******9.**********82....46********************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.59994152IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-1694141IPR016177DNA-binding domain
SMARTSM003801.4E-1894148IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-2294142IPR001471AP2/ERF domain
CDDcd000181.85E-2494141No hitNo description
PfamPF008471.1E-1394143IPR001471AP2/ERF domain
PRINTSPR003671.8E-1095106IPR001471AP2/ERF domain
PRINTSPR003671.8E-10117133IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MPGIRRSISF ETDSTNRKPK QKIRFICSDP YATESSDDEG VAEKKAKRVI NEVYFAATAL  60
EPDVSVQESN NGEKSLKKKD INIVDSKPNP VTGKYRGVRQ RKWGKWAAEI RDPIQHKRVW  120
LGTYGTAEEA SRAYESKRIE FEAMANKTVS CRKPQALVEH GTAAAPDVAL TEDSCGSNAS  180
FLSELDSSTS AAKCDSFDQD DSFRVSDPLS IDTELMALAQ IGTDIDLEFE IDGLLSFDDF  240
SLEDLPICGL DTGDDPHPTS FLDFGFDSDF DFDFASVIDD PPGVIGGSAP LDVACP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-13931361357Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMap678424138
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.11e-83ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G9GJ622e-81A0A2G9GJ62_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-28ERF family protein