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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
678423734 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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| Family |
BBR-BPC |
| Protein Properties |
Length: 280aa MW: 30912.3 Da PI: 9.9428 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 678423734 | genome | UGSP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 308.6 | 2.2e-94 | 1 | 280 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalll 86
md+d+ rn+gyyep lk +lglqlmss+ erd+k+ r++ + ++++ +rd +++ rd+++++ ++k+l++l+
678423734 1 MDEDSL--RNWGYYEPP--LKGHLGLQLMSSVMERDTKPflsgRDNPA-AVSSNGGAFTRDyivtepplsnIDY-VRDSWINH--------REKFLHMLP 86
788855..9********..********************999666555.5566667778999999999999999.99****99........789999999 PP
GAGA_bind 87 venslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader 186
n+ +s + + s +s+q++++p+ +++ +e a +ke++ +k++ a+ pk+ kakk+kk ++ +k++v+++ +r
678423734 87 G-NGYSS------LLAEPSGSHHSVQMVHQPEANKEI----------MRDVEGPA-PKKESSATKRGTPAAAPKTVKAKKPKK-GPGPKENVNASV--QR 165
4.33222......223333344455554444333322..........23333333.3444555566777899**********9.889999999999..79 PP
GAGA_bind 187 skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLk 286
+k+ k+++++++ngv++D++++P+PvC+CtG+++qCY+WG+GGWqSaCCtttiS++PLP+stkr+gaRi grKmSqgafkk+LekLa+e yd+snp+DL+
678423734 166 AKSVKRTVEVSINGVDMDITGIPIPVCTCTGTPQQCYRWGCGGWQSACCTTTISMHPLPMSTKRKGARIPGRKMSQGAFKKVLEKLASEDYDFSNPIDLR 265
**************************************************************************************************** PP
GAGA_bind 287 dhWAkHGtnkfvtir 301
++WAkHGtnkfv ir
678423734 266 TYWAKHGTNKFVVIR 280
*************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MDEDSLRNWG YYEPPLKGHL GLQLMSSVME RDTKPFLSGR DNPAAVSSNG GAFTRDYIVT 60
EPPLSNIDYV RDSWINHREK FLHMLPGNGY SSLLAEPSGS HHSVQMVHQP EANKEIMRDV 120
EGPAPKKESS ATKRGTPAAA PKTVKAKKPK KGPGPKENVN ASVQRAKSVK RTVEVSINGV 180
DMDITGIPIP VCTCTGTPQQ CYRWGCGGWQ SACCTTTISM HPLPMSTKRK GARIPGRKMS 240
QGAFKKVLEK LASEDYDFSN PIDLRTYWAK HGTNKFVVIR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
