PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678421569
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 524aa    MW: 58826.7 Da    PI: 6.5109
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678421569genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM183.35.7e-5761341129
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                lppGfrFhPtdeelv +yLk+k++g++++l e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s +++
  678421569   6 LPPGFRFHPTDEELVAYYLKRKINGQRIDL-EIIPEVDLYKCEPWDLPgKsFLPSKDMEWYFFSCRDRKYPNGSRTNRATKAGYWKATGKDRKVSS-QTR 103
                79****************************.99***************6435566888*************************************9.999 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                +vg+kktLv+y+grap+g +tdWvmheyrle
  678421569 104 AVGMKKTLVYYRGRAPHGARTDWVMHEYRLE 134
                9****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.58E-644156IPR003441NAC domain
PROSITE profilePS5100559.7116156IPR003441NAC domain
PfamPF023657.8E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING QRIDLEIIPE VDLYKCEPWD LPGKSFLPSK  60
DMEWYFFSCR DRKYPNGSRT NRATKAGYWK ATGKDRKVSS QTRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLEEGECET SSGLQDAYAL YRVFKKSLNP PKCEDRYVAA SASEGDRRFD  180
EADPDSSALI GSGNDPGWGP FLSEEEEFEF SFSNMHSSSS SSMPYPPSRV NVESMECARL  240
QARISRPPLE VQAFAAAYGN PMSMSGGDVF PENENQRPDI VQEILAFAQA SQDTNSSHHQ  300
GRTFDGTYSG NNELSFYLHG DQPAAQPYDA GVRNIEIGEN EPVFRFPEHM PWIGISDEEL  360
EKAFPDAFQI HSSSLSNLHG GQHHDFQGED AFHHSTPYSL KPNHTFGAET SSIDDFGGAE  420
LLTGKSQVNH ALLVSTRQPP RTLYHKTVPC RTVQVHMGHH HLPSPMRRSM GLQEKMASFI  480
RNALAGLRLM TSQKLPFALV LWSGPSVISS YRSADPVNLL LPHP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-53115612165NO APICAL MERISTEM PROTEIN
1ut4_B2e-53115612165NO APICAL MERISTEM PROTEIN
1ut7_A2e-53115612165NO APICAL MERISTEM PROTEIN
1ut7_B2e-53115612165NO APICAL MERISTEM PROTEIN
4dul_A2e-53115612165NAC domain-containing protein 19
4dul_B2e-53115612165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678421569
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096933.11e-174NAC domain-containing protein 45
TrEMBLA0A2G9GMX51e-165A0A2G9GMX5_9LAMI; Uncharacterized protein
STRINGMigut.K00745.1.p1e-149(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-119NAC domain containing protein 28