PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678415996
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GRAS
Protein Properties Length: 574aa    MW: 62231.6 Da    PI: 6.7908
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678415996genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2721.9e-832165742374
       GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                +++L+++A a+s+g+  +a ++ +rl e      +p + l+ay++ A ++r +         lp+     +  +e + ++++++ vsP++k+++++aN a
  678415996 216 RQALIDAAVAISEGKPDAAAEIFTRLLE------EPKHSLTAYMVSAFKSRGSF-------NLPS-----MAAEEYAVSTQMLYCVSPCFKLGFIAANLA 297
                5788888888888888888888888865......56777888888888888665.......2233.....335677788899****************** PP

       GRAS 102 Ileavege....ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                Il a+++     e++H++Df+++qG+Q++ Ll++La+ + g+ sl iT++   +   +e+l+++ge L+ +  ++gv++ f+v    ++++++ e+L+++
  678415996 298 ILGAASERnpcfEKIHVLDFELGQGGQYVHLLHTLAAAETGSKSLTITAFTY-SGAAEEKLRTVGEVLKALSLKIGVSLIFHV-RDFNIAAISREKLEIN 395
                ****999889999**************************************9.5559*************************9.677************* PP

       GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgreivn 296
                ++EalaVn++++lh+l+desv++e+ rd++L+ vk+lsP vv+vveqe+++n++++ +r+ +a +yy+al++sl+++++++s  +r+ + +  +gr+i n
  678415996 396 SDEALAVNFAFKLHKLPDESVTVENIRDDLLRRVKTLSPAVVTVVEQELNTNTAPLITRVRDAYDYYAALLESLDSTVAADSpPDRARILNG-IGRRILN 494
                **********************************************************************************8899999998.******* PP

       GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 va eg+er+er+e ++kWr r+++aGF+p  +s +a+++ ++ l+  +  + g++v e+sg +++gW++++L+++SaWr
  678415996 495 SVASEGRERVERCEVFGKWRCRMSMAGFQPFVISPRATESLRAKLNSGArvNPGFTVSEDSGGICFGWRGKTLTVASAWR 574
                ******************************************99988766789**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098537.284189552IPR005202Transcription factor GRAS
PfamPF035146.7E-81216574IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MSSGGPPDFY SAASGSAAAS VLLSSAAGVY NPLLAQEGHF SMVGRDAGAQ IRLPDFIGKR  60
SLVDVQQNQQ ALGFYLRSMK KMRPHYEVSP LAFSPITSIP RYGVPILRQQ GIRDSTLATA  120
SFSNSPVIPS AVNGDFFTRT EETEKSLMNH RLKELEKELL KDEEEDGSVS VVTNTELSEA  180
IRNLIDPAQN SISPSPTSSS SSSSSSSVSQ PSPCQRQALI DAAVAISEGK PDAAAEIFTR  240
LLEEPKHSLT AYMVSAFKSR GSFNLPSMAA EEYAVSTQML YCVSPCFKLG FIAANLAILG  300
AASERNPCFE KIHVLDFELG QGGQYVHLLH TLAAAETGSK SLTITAFTYS GAAEEKLRTV  360
GEVLKALSLK IGVSLIFHVR DFNIAAISRE KLEINSDEAL AVNFAFKLHK LPDESVTVEN  420
IRDDLLRRVK TLSPAVVTVV EQELNTNTAP LITRVRDAYD YYAALLESLD STVAADSPPD  480
RARILNGIGR RILNSVASEG RERVERCEVF GKWRCRMSMA GFQPFVISPR ATESLRAKLN  540
SGARVNPGFT VSEDSGGICF GWRGKTLTVA SAWR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A1e-2621457411375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678415996
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076123.10.0scarecrow-like protein 8
TrEMBLA0A2G9I9L60.0A0A2G9I9L6_9LAMI; Uncharacterized protein
TrEMBLS8EMR10.0S8EMR1_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.F01094.1.p1e-179(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40232443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-117SCARECROW-like 8