PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678410834
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 405aa    MW: 45858.8 Da    PI: 8.9626
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678410834genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78e-11118160345
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                + k +rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  678410834 118 DQKTQRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 160
                6799**************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-9116179IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.634118162IPR004827Basic-leucine zipper domain
PfamPF001701.1E-7119160IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.8E-7120163No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-8120165No hitNo description
CDDcd147081.86E-21120172No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
PfamPF141446.7E-30202277IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MLDYRTILRL RTRVLLVLYW DLKLYNERIG PILNISSSAP ENQNWIESNM EECSSRTDSS  60
TDADPDNQKA NFFSMVPSHN QRITLVLTLL VFSHLQSGQF DGVPGLDSSD KSKEKNPDQK  120
TQRRLAQNRE AARKSRLRKK AYVQQLENSR LKLTQLEQEL QRARQQGIFM SSMRDQANAG  180
NANGALTFDA EYSRWLEEQS RHVSELRTAI NAHAGDTELG TLVETVAVHF YSIFKMKGNA  240
AKDDVFHILS GMWKTPAERC FLWIGGFRPS ELLKLLVNHL EPLTEQQLNG LYNLQQSSHQ  300
AEDALAQGMD ALQQSLAETL ANGSSGTDGT SGNVGNYMGQ MAMAMGKLGT LEGFLRQADN  360
LRQQTLQQMH RILTTRQSAR ALLLIHDYFS RLRALSSLWL ARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678410834
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020549044.10.0transcription factor TGA2.3 isoform X2
RefseqXP_020549045.10.0transcription factor TGA2.3 isoform X4
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLS8E5090.0S8E509_9LAMI; Uncharacterized protein
STRINGSolyc10g080770.1.10.0(Solanum lycopersicum)
STRINGPGSC0003DMT4000609260.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.41e-135TGACG motif-binding factor 6