PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678410383

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

bZIP

Protein Properties

Length: 422aa MW: 45849.6 Da PI: 5.7925

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678410383	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.5	1.1e-16	228	284	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l +++++ + 678410383 228 DAKRMRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISQKYNEA 284 68******************************************9999999988765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.5E-13	222	282	No hit	No description
SMART	SM00338	9.4E-19	226	290	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.794	228	283	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.1E-14	229	282	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.64E-12	230	280	No hit	No description
CDD	cd14702	2.91E-6	231	282	No hit	No description
PROSITE pattern	PS00036	0	233	248	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	4.3E-30	297	418	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence Send to blast
MDRVFSVDEM ADPYWSSHAP PNRLREKADS DQQSVSAAAP SSSSTKDLRI SRSPSEWALQ 60 KFLQEVALPG RDSGVPEGDD NADIKGHHEV QKDDQSRQIV PPPSIPTDSE AYQAFLKSRL 120 DLACAAVAMN WATNPKPPES VPAASEGGSQ ASNSSNIKGD WTNPSEWETM KSQDRDSAQP 180 LGTPLAPAAS RKSGAQVRST TSGSSGELSD YDEADGETED TQNQDPADAK RMRRMLSNRE 240 SARRSRRRKQ AHLTELETQV SQLRGENSSL LKRLTDISQK YNEAAVDNRV LKADVETLRA 300 KVKMAEESVK RVTGLNPLFQ AMSEMTTVEI PSFIGSPDAS AEASVPLQEE PNQRCYQTST 360 SGHMMDRRPQ SSFVDSISAE SQPQKAAPGA GVSKMGGNGS LPRVASLEHL TKRIREGAGG 420 KK

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence Send to blast

MDRVFSVDEM ADPYWSSHAP PNRLREKADS DQQSVSAAAP SSSSTKDLRI SRSPSEWALQ  60
KFLQEVALPG RDSGVPEGDD NADIKGHHEV QKDDQSRQIV PPPSIPTDSE AYQAFLKSRL  120
DLACAAVAMN WATNPKPPES VPAASEGGSQ ASNSSNIKGD WTNPSEWETM KSQDRDSAQP  180
LGTPLAPAAS RKSGAQVRST TSGSSGELSD YDEADGETED TQNQDPADAK RMRRMLSNRE  240
SARRSRRRKQ AHLTELETQV SQLRGENSSL LKRLTDISQK YNEAAVDNRV LKADVETLRA  300
KVKMAEESVK RVTGLNPLFQ AMSEMTTVEI PSFIGSPDAS AEASVPLQEE PNQRCYQTST  360
SGHMMDRRPQ SSFVDSISAE SQPQKAAPGA GVSKMGGNGS LPRVASLEHL TKRIREGAGG  420
KK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	249	RRSRRRKQ
2	244	249	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678410383

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091948.1	1e-159	light-inducible protein CPRF2
Swissprot	Q99090	1e-101	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A172W5J7	1e-142	A0A172W5J7_AVIMR; Putative light inducible protein CPRF2
STRING	Migut.N01912.1.p	1e-133	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2934	24	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-65	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]