PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678399425 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 21059.1 Da PI: 10.0081 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr++ ++g+Wv+eIr+p +r++lg+f+tae+Aa+a+++a+ ++g 678399425 20 KFRGVRQR-YWGSWVSEIRHP-----LlkRRVWLGTFDTAEKAARAYDEAAVIMRG 69 89****77.5**********8.....334**********************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 4.2E-32 | 19 | 77 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.9E-11 | 20 | 68 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.48E-31 | 20 | 78 | No hit | No description |
SuperFamily | SSF54171 | 2.16E-20 | 20 | 78 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.9E-36 | 20 | 83 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.997 | 20 | 77 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-10 | 21 | 32 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-10 | 43 | 59 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MLPVRSGQLA TSYMVPQRRK FRGVRQRYWG SWVSEIRHPL LKRRVWLGTF DTAEKAARAY 60 DEAAVIMRGR NAKTNFPIPA EVFPSSAYTS LAAILNAKLQ KCGKSPPSPS LTCLRLDTEN 120 SHIGVWQKRA GPRSGSRWVM TVELGNKGRI AAEAELPAAE VEGEAAHVAG DVASDEEERI 180 ALQMIEELLT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 7e-16 | 20 | 77 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678399425 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021666622.1 | 4e-76 | ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 5e-64 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A2I4H6I9 | 8e-73 | A0A2I4H6I9_JUGRE; ethylene-responsive transcription factor WIN1-like | ||||
TrEMBL | S8CLD5 | 1e-72 | S8CLD5_9LAMI; Uncharacterized protein | ||||
STRING | cassava4.1_016167m | 5e-73 | (Manihot esculenta) | ||||
STRING | XP_010254403.1 | 3e-73 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1352 | 24 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 4e-54 | ERF family protein |