PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678398351
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 390aa    MW: 42596.2 Da    PI: 6.4177
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678398351genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.7e-12280338563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                kr++r   NR +A rs +RK+ +i eLe kv++L++e ++L  ++  l+ke ++l++++
  678398351 280 KRAKRILANRQSAARSKERKLRYISELEHKVQTLQTEATTLSAQVTILQKEFSELTAQN 338
                9******************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-18276340IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.358278341IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-12280335No hitNo description
PfamPF001701.2E-10280338IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-12280336No hitNo description
CDDcd147036.23E-25281330No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MYGNSCLPPL SPFPPSESSR ASSSSNPNDV SMEEVDVSSN GPQMLPSFPW ENNFSGDNSF  60
PPRRGHRRSN SDLPSGFSAT LQSAHQMAPC NQGRLGDLRE VFGNGKFVGV KHDNVDIFGF  120
RKCNGAEFGD ISSDGEVVDD LFNSLLNMDN VNELNSNGAL DVDKDTTMGS VKLPSGETYS  180
SDSASLRPGE RAKRSATGNI GPPARHSRSL SMDSAMVKFE FDDEYPKKSS VSNHLSPSSS  240
VNGDSYALNL DFGNGGFNDH DLKKIMKDEK LAEIALSDPK RAKRILANRQ SAARSKERKL  300
RYISELEHKV QTLQTEATTL SAQVTILQKE FSELTAQNNE LKFRVQAVEN QAKLKDALNS  360
SMAAEIQRLK LGGLELRDGS KQKEAGQRAP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678398351
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083495.11e-132transcription factor VIP1 isoform X2
RefseqXP_011083496.11e-132transcription factor VIP1 isoform X1
RefseqXP_020551039.11e-132transcription factor VIP1 isoform X1
TrEMBLA0A2Z7A1T21e-131A0A2Z7A1T2_9LAMI; Uncharacterized protein
STRINGXP_009803494.11e-113(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-76bZIP family protein