PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678391562
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 336aa    MW: 37161.7 Da    PI: 6.6761
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678391562genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.11.7e-122347125
    G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
               kprlrWt eLHerFveav+qLGG++
  678391562 23 KPRLRWTVELHERFVEAVTQLGGPD 47
               79*********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-112048IPR009057Homeodomain-like
PfamPF143797.8E-23134177IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MFPGGQKKSS MCDSGLVLTT DPKPRLRWTV ELHERFVEAV TQLGGPDSDA EDDHEGYGSE  60
GLDSVSSQEP SPEIQAWKAA SQGLLRSLPK RWFIAGTPPE QHELVANAWT RYERVRSSSF  120
TSYVILRAQT LTSNDALRMQ MEVNRRLHEQ LEVQRHLQLR IEAQAKYMQG ILQKACQSLA  180
GEDMAAAAVS RGYNDAASGV EIPMSHHPPL QDLNVYASPD QLHHHQGPFS GKKQPCLYFN  240
PADSAGKSPF IWTDDLRLQE LGGATASMQD HHRIKMCPVT CEEGDSVSNM YDSKSLLTGD  300
QKKFGGSGKI NRPAATTAGS MPLGRGEARM HHMHDI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678391562
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095765.15e-75myb family transcription factor APL isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.27e-52G2-like family protein