PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678389517
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 276aa    MW: 31221.1 Da    PI: 9.6536
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678389517genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP138.94.3e-43561752134
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksq 101
                ++kk rhski T++g+RdRRvRls+ +a++fFdLq++L fdk+s t++WLl+++k+aikel++++ +             ++  ss+ +++++ k++ ++
  678389517  56 TAKKNRHSKINTAQGPRDRRVRLSIGIARKFFDLQEMLEFDKPSDTLDWLLTNSKTAIKELVQNKEK-----------LGQGITSSPLECSKQVKESVER 144
                78**************************************************************332...........3333445557889999999999 PP

        TCP 102 ksaasalnlakesrakarararertrekmrikn 134
                ++++  ++lakesrakar rarert+ekm+ik+
  678389517 145 HPNS--SSLAKESRAKARDRARERTKEKMCIKS 175
                9999..*************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-3256133IPR005333Transcription factor, TCP
PROSITE profilePS5136933.19658116IPR017887Transcription factor TCP subgroup
PfamPF036340.0041134172IPR005333Transcription factor, TCP
PROSITE profilePS5137011.746153170IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MFSKTAFTVN DEEIILHPQT RMLPAHHFVS PTPPDYEMNG DLSGVTNAAA SETKRTAKKN  60
RHSKINTAQG PRDRRVRLSI GIARKFFDLQ EMLEFDKPSD TLDWLLTNSK TAIKELVQNK  120
EKLGQGITSS PLECSKQVKE SVERHPNSSS LAKESRAKAR DRARERTKEK MCIKSLAEEH  180
KRGANMQFSE LLAGSSNSNP SFLNEDSLIR RPGFGDLIHE PGTKPKNPCF PIIQQNLAVT  240
RDFNSNYTTS STADWDNFAS EPNVYVIFDQ HKFINR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00215DAPTransfer from AT1G67260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678389517
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554786.12e-48transcription factor CYCLOIDEA
TrEMBLA0A096ZGF63e-59A0A096ZGF6_9LAMI; TCP transcription factor (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.15e-30TCP family protein