PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678387490
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 209aa    MW: 23006.2 Da    PI: 4.5958
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678387490genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172372255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  678387490 23 KYRGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEQAARAFDAALYCLRG 72
               8*****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.3E-102372IPR001471AP2/ERF domain
PROSITE profilePS5103221.9442380IPR001471AP2/ERF domain
SMARTSM003801.3E-312386IPR001471AP2/ERF domain
CDDcd000183.97E-272382No hitNo description
SuperFamilySSF541714.51E-202381IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.6E-302381IPR001471AP2/ERF domain
PRINTSPR003674.4E-102435IPR001471AP2/ERF domain
PRINTSPR003674.4E-104662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MYRSPSPSPS SQESSPSSAA GVKYRGVRKR KWGKYVSEIR LPNSRERIWL GSYDTAEQAA  60
RAFDAALYCL RGRSAKFNFP DTPPEIDNGR SMSPAEIQVA AAHFAYADSG AQAESDLVGA  120
SESRSGSFEG EITEMSLVDN YSTCFDGANG FMELGSFSEF DSYWDRPMTP SLLPPAGFPE  180
NHEHVFSSAS FPENDEHVFS SGSSFLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1823801472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678387490
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093871.13e-52ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2G9HGZ02e-51A0A2G9HGZ0_9LAMI; Uncharacterized protein
STRINGXP_009624342.12e-50(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-47ERF family protein