PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678387159
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 308aa    MW: 35147.5 Da    PI: 10.3459
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678387159genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP139.92.1e-43912103135
        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksqk 102
                +kkdrhski+T++g+RdRRvRls+ +a++fFdLq+ LGfdk+skt++WLl+++k ai +l++  +++              +s +gk+ + + k++ + +
  678387159  91 AKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQELLGFDKPSKTLDWLLTKSKNAINDLVQKRQNAD-------------TSDKGKSPEGSRKRHGRAA 177
                79*************************************************************55555.............2333445555557777777 PP

        TCP 103 saasalnlakesrakarararertrekmriknk 135
                ++++a +l kesr karararertrekm+++++
  678387159 178 KDSQAVDLVKESRVKARARARERTREKMQMRSS 210
                777789************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.1E-3491175IPR005333Transcription factor, TCP
PROSITE profilePS5136934.93892150IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137012.151187204IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MLKKKREEGG VWFLIDLREA IYELKMFGSK ESHIFSSFHS QPSTSIAALS DAEASQIHRN  60
HRHLLSGTYT TSGVEVPEQE PPNTNDGKPG AKKDRHSKIY TSQGPRDRRV RLSIGIARKF  120
FDLQELLGFD KPSKTLDWLL TKSKNAINDL VQKRQNADTS DKGKSPEGSR KRHGRAAKDS  180
QAVDLVKESR VKARARARER TREKMQMRSS RDFSTLSSSI PMQYMNHPNG FNDYQQLNQD  240
MIQESVVIKM KAKPHPSIFG FHQNLIISRD FTSNCAIPAP YTSTENWDIS NPQSNAYSAL  300
DQYKFNDR
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator involved in the dorsovental asymmetry of flowers. Promotes dorsal identity. {ECO:0000269|PubMed:10571179}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678387159
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551451.18e-67transcription factor DICHOTOMA-like
SwissprotQ9SNW83e-42DICH_ANTMA; Transcription factor DICHOTOMA
TrEMBLA0A096ZGA01e-63A0A096ZGA0_9LAMI; TCP transcription factor (Fragment)
STRINGMigut.H00528.1.p6e-46(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.26e-28TCP family protein
Publications ? help Back to Top
  1. Luo D, et al.
    Control of organ asymmetry in flowers of Antirrhinum.
    Cell, 1999. 99(4): p. 367-76
    [PMID:10571179]