PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678386998

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 296aa MW: 32654 Da PI: 9.4988

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678386998	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.7	3.3e-35	98	157	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e++l+cprCds++tkfCy+nny +qPr+fCk+CrryWt+GG rnvP G+grrk k+s 678386998 98 PEAILPCPRCDSKHTKFCYFNNYKANQPRHFCKSCRRYWTAGGVTRNVPFGAGRRKIKHS 157 67889***************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-23	92	155	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.8E-29	101	156	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.279	102	156	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	104	140	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MPEVKDPRIK LFGKTIALPK ICHRNQESHL SCKDGCSAAN QEPSESDQIM GGCNVTMMMP 60 GEEGAGALES DDSQGLKLSE TAERAETGVP MEKPLQKPEA ILPCPRCDSK HTKFCYFNNY 120 KANQPRHFCK SCRRYWTAGG VTRNVPFGAG RRKIKHSTVK SLHATGVQTL GMDHPMASSL 180 KSSSSNGWHP YREPGSWAAS KSSISTSRHD MGKKGLQEQM LNWYPQSPCF PGSQWHTVHR 240 SCPTSPSIFA YGPAFISCTA SPSWAFPGII PPSATLGKHP RDQNNHREGT RNIKNR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678386998

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA532	24	122

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-37	cycling DOF factor 3