PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678386660
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 281aa    MW: 30677.9 Da    PI: 8.3717
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678386660genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.3e-1861110255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f taeeAa+a+++a+  l+g
  678386660  61 RYRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEEAARAYDRAAVVLYG 110
                59****999.**********954...5999******************977665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.3E-3661124IPR001471AP2/ERF domain
PfamPF008476.9E-1261105IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2961119IPR001471AP2/ERF domain
PROSITE profilePS5103222.53761118IPR001471AP2/ERF domain
CDDcd000181.19E-2961120No hitNo description
SuperFamilySSF541713.86E-2161120IPR016177DNA-binding domain
PRINTSPR003671.3E-106273IPR001471AP2/ERF domain
PRINTSPR003671.3E-1084100IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
LLFLCPSLLL SYFGHRVREQ PLTMSGADAA NPNNSPPPET SPPLNKRPSK GKGGPDNGKF  60
RYRGVRQRSW GKWVAEIREP RKRTRRWLGT FATAEEAARA YDRAAVVLYG SKAQLNLQTS  120
VAGTGRSGGG DARERASSSS STQRLLRPLL PRPSGYGLTF PMPTPPSSYP AAPASRPYEM  180
TQGEAAAMRE WSETAVPFQN PNSSSGWQEE NPQQFSNYHG YDEMSPLAPP DPTQAPPQSD  240
PAALLNGGYT SWPPFGNEPD DGYPSNSIWD DGDPFFFDNI *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1551117571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678386660
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022864692.13e-50ethylene-responsive transcription factor ABI4-like
TrEMBLA0A4D8ZRB48e-50A0A4D8ZRB4_SALSN; EREBP-like factor
STRINGEOY177254e-44(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.19e-28ERF family protein