PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678383551

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

TCP

Protein Properties

Length: 339aa MW: 35898.2 Da PI: 7.4082

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678383551	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.5	1.3e-39	44	131	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s ++s+s+ s++ 678383551 44 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISVRNSGSTVSAP 131 689******************************************************************9996556666655543333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	3.1E-38	48	151	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	27.001	50	104	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MECGNGSSLQ RSHFALQLLE QKDHEEAAAA AATAVAKSQE KKTPPKRTST KDRHTKVDGR 60 GRRIRMPATC AARVFQLTKE LGHKSDGETI EWLLQQAEPA VIAATGTGTI PANFTSLNIS 120 VRNSGSTVSA PVHFRHNSYL NPSFGATQFV TVPDQWEKSG LDERRVLLPG VEGLSSGNAM 180 NFLSGNLSLG PMLQSKQKSP NNGLEMSVSV ATTAEEDLPP AMSNYMVQST AGAIPAGQIH 240 TPNTAFLMVT NPNSQVKISS ESLWPFASHM ASSSIYRSAP AATSGLHLLN FPPSLPGLRG 300 GETQVDGHVG MLSALNAFKP IGNNEGQEGH ASSSDGADN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678383551

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011071008.1	1e-114	transcription factor TCP15
TrEMBL	A0A022QL97	2e-94	A0A022QL97_ERYGU; Uncharacterized protein
STRING	Migut.L01307.1.p	3e-95	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2882	23	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	5e-50	TCP family protein