PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678382171
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 368aa    MW: 39853.1 Da    PI: 7.9467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678382171genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.32.8e-21187236255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+W+AeIrdp    +r +r++lg+++taeeAa+a++aa+ +++g
  678382171 187 KYRGVRQRP-WGKWAAEIRDP----QRaARVWLGTYDTAEEAARAYDAAAFRFRG 236
                8********.**********9....258*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-32186245IPR001471AP2/ERF domain
CDDcd000181.30E-20187246No hitNo description
PROSITE profilePS5103225.963187244IPR001471AP2/ERF domain
PfamPF008473.3E-15187236IPR001471AP2/ERF domain
SMARTSM003801.2E-35187250IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23187244IPR016177DNA-binding domain
PRINTSPR003676.3E-12188199IPR001471AP2/ERF domain
PRINTSPR003676.3E-12210226IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MFSSSSFLSS SLNRHTMRSA GSRMAFVVAH RRDSRDYSGR VQGEDARGRE GAASAAVLQE  60
EEAGSRGTEI VTGGNFGELL MGMQGMRGEE DKQEDYLLSA VVAPMMVLSG PGHQRETSEM  120
VSALTRVVSS TAATSTAAPL DSPFAYSSSG RNQKRHRDTQ QLTEDDVGIS DDRPTTSTPT  180
APQTRRKYRG VRQRPWGKWA AEIRDPQRAA RVWLGTYDTA EEAARAYDAA AFRFRGNRAK  240
LNFPEVARLP HPPAPPVVIN PSPPPPVDVP ASLLHTTVSD YLQYSRILQS SGGDFQSLQP  300
PNIYQQSSYS YGGLYPQQAF NTPSPTAPSA APQFGMLYSA AGTSNHQLHE PGSRTGNSPA  360
DPETPPPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-22186244463ATERF1
3gcc_A1e-22186244463ATERF1
Cis-element ? help Back to Top
SourceLink
PlantRegMap678382171
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101230.13e-38ethylene-responsive transcription factor ABR1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-18ERF family protein