PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678378510

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 282aa MW: 30705.9 Da PI: 6.4979

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678378510	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.9	2.2e-38	19	78	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+s 678378510 19 PEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKRS 78 57899***************************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-28	17	76	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.5E-33	21	76	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.161	22	76	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	24	60	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MATESVERKP MKHSQPPEPE HLPCPRCDST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG 60 TLRDIPIGGG SRKNAKRSRN GSVSSVSASS SSCSSSAAAV AHFGIPAEVA SQFIAPFAAD 120 HTPCFRDTFT SLLNTQGAGM WALGGFGFGS RFGFEDMGFG HARGSWPITD VAAPAVFTTT 180 SPAGVTSGPY TWQVEGGDGA FSGFQLNHLN SSFSTRYVFA EIPPWAYAMG NHDDEEWESG 240 DVVECDDMGS SRSFTTYYQQ FQVQIGHADG TDDMRVAGIC RV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678378510

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012852923.1	1e-65	PREDICTED: dof zinc finger protein DOF3.4-like
TrEMBL	A0A022RWC0	3e-64	A0A022RWC0_ERYGU; Uncharacterized protein
STRING	Migut.H00486.1.p	4e-65	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4532	22	41

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	2e-37	Dof family protein